Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv16A0A0B4J1H3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv16A0A0B4J1H3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv16A0A0B4J1H3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Gm15820-201ENSMUST00000201566 728 ntBASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv16A0A0B4J1H3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.02□□□□□ -0.16
Trbv16A0A0B4J1H3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv16A0A0B4J1H3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms