Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.02■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm29257-201ENSMUST00000186115 639 ntBASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-43A0A0A6YXN5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms