Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ighv1-20A0A0A6YX66 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 AA386476-201ENSMUST00000098781 1665 ntBASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm42778-201ENSMUST00000199644 553 ntBASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm42642-201ENSMUST00000200683 355 ntBASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-20A0A0A6YX66 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.72■□□□□ 0.11
Ighv1-20A0A0A6YX66 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm18671-201ENSMUST00000214826 683 ntBASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gm9988-201ENSMUST00000069786 435 ntBASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-20A0A0A6YX66 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-20A0A0A6YX66 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-20A0A0A6YX66 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms