Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv23A0A0A6YWQ1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.68■□□□□ 0.26
Trbv23A0A0A6YWQ1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm7417-201ENSMUST00000192950 473 ntBASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm9959-201ENSMUST00000068277 390 ntBASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv23A0A0A6YWQ1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Grk6-206ENSMUST00000224995 2971 ntBASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv23A0A0A6YWQ1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv23A0A0A6YWQ1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv23A0A0A6YWQ1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Rps24-207ENSMUST00000224568 714 ntBASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv23A0A0A6YWQ1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv23A0A0A6YWQ1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms