Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.71■□□□□ 0.1
Trav6d-5A0A075B6B9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm43530-201ENSMUST00000195920 274 ntBASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav6d-5A0A075B6B9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 AA386476-201ENSMUST00000098781 1665 ntBASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-5A0A075B6B9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-5A0A075B6B9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-5A0A075B6B9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-5A0A075B6B9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms