Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.99□□□□□ -0.01
Trav16A0A075B653 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.98□□□□□ -0.01
Trav16A0A075B653 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav16A0A075B653 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav16A0A075B653 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav16A0A075B653 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav16A0A075B653 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav16A0A075B653 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trav16A0A075B653 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav16A0A075B653 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav16A0A075B653 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.95□□□□□ -0.02
Trav16A0A075B653 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16A0A075B653 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Gm10399-202ENSMUST00000202768 748 ntBASIC14.94□□□□□ -0.02
Trav16A0A075B653 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms