Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-2-dv6-2A0A075B650 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms