Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav14n-3A0A075B645 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav14n-3A0A075B645 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav14n-3A0A075B645 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav14n-3A0A075B645 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav14n-3A0A075B645 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Grk6-206ENSMUST00000224995 2971 ntBASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 BC021767-201ENSMUST00000126387 1716 ntBASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav14n-3A0A075B645 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav14n-3A0A075B645 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav14n-3A0A075B645 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav14n-3A0A075B645 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 251.3 ms