Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.52■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Gm9870-201ENSMUST00000063874 645 ntBASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Etf1-202ENSMUST00000180351 108 ntBASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15d-1-dv6d-1A0A075B624 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms