Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6-6A0A075B603 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-6A0A075B603 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-6A0A075B603 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-6A0A075B603 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-6A0A075B603 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-6A0A075B603 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-6A0A075B603 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav6-6A0A075B603 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-6A0A075B603 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-6A0A075B603 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-6A0A075B603 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-6A0A075B603 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-6A0A075B603 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms