Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ighv1-54A0A075B5W5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-54A0A075B5W5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-54A0A075B5W5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-54A0A075B5W5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-54A0A075B5W5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-54A0A075B5W5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-54A0A075B5W5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-54A0A075B5W5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-54A0A075B5W5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-54A0A075B5W5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-54A0A075B5W5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm40848-201ENSMUST00000221998 324 ntBASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-54A0A075B5W5 Golph3-202ENSMUST00000226517 2359 ntBASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms