Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv4A0A075B5I2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv4A0A075B5I2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv4A0A075B5I2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv4A0A075B5I2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv4A0A075B5I2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv4A0A075B5I2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv4A0A075B5I2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv4A0A075B5I2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv4A0A075B5I2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv4A0A075B5I2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv4A0A075B5I2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trbv4A0A075B5I2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Trbv4A0A075B5I2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv4A0A075B5I2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv4A0A075B5I2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv4A0A075B5I2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv4A0A075B5I2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv4A0A075B5I2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.5■□□□□ 0.71
Trbv4A0A075B5I2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trbv4A0A075B5I2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv4A0A075B5I2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trbv4A0A075B5I2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv4A0A075B5I2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv4A0A075B5I2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Trbv4A0A075B5I2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Mir7075-201ENSMUST00000184187 82 ntBASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms