Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC163646.3-202ENSMUST00000228685 691 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Defb6-201ENSMUST00000063112 323 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Klk1b4-201ENSMUST00000077354 839 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Trim9-201ENSMUST00000110520 4156 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Nr5a2-203ENSMUST00000192357 1859 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Polr3c-206ENSMUST00000154679 2406 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm37785-201ENSMUST00000195783 2408 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm17249-201ENSMUST00000181277 3500 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Cbwd1-201ENSMUST00000025815 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Nde1-202ENSMUST00000115795 2335 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Itih1-202ENSMUST00000163118 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Itih1-201ENSMUST00000006704 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm4877-201ENSMUST00000104977 798 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm26532-201ENSMUST00000180630 690 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Igkv3-11-201ENSMUST00000197500 385 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm30652-201ENSMUST00000199103 430 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm4778-201ENSMUST00000098878 1098 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm20705-201ENSMUST00000177278 1921 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Olfml1-201ENSMUST00000120990 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Ercc3-201ENSMUST00000025241 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Arhgap12-201ENSMUST00000062584 2718 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 BC030343-201ENSMUST00000199606 2439 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.22□□□□□ -0.93
Clrn1Q8K445 Gm34280-201ENSMUST00000208250 2114 ntTSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clrn1Q8K445 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.21□□□□□ -0.93
Clrn1Q8K445 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Clrn1Q8K445 BB014433-203ENSMUST00000179941 1543 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Creb5-201ENSMUST00000047450 2330 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.21□□□□□ -0.93
Clrn1Q8K445 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Top3a-203ENSMUST00000117743 2932 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Clrn1Q8K445 Nrf1-202ENSMUST00000069808 1658 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms