Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm8326-201ENSMUST00000188705 1953 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Cep57-203ENSMUST00000124883 1643 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm28048-201ENSMUST00000160826 2746 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm16560-201ENSMUST00000159115 404 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm16581-201ENSMUST00000160730 991 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm3466-201ENSMUST00000181797 1192 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Mir7035-201ENSMUST00000184713 82 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm42617-201ENSMUST00000197640 1229 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm8083-201ENSMUST00000203976 475 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Nosip-207ENSMUST00000210520 534 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm18974-201ENSMUST00000221478 1031 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm25514-201ENSMUST00000083860 135 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Atf7-201ENSMUST00000096143 390 ntBASIC8.01□□□□□ -1.13
Hmgb3O54879 Olfr1229-201ENSMUST00000099788 1019 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gm20705-201ENSMUST00000177278 1921 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Abcd3-204ENSMUST00000197383 3156 ntTSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Nek11-201ENSMUST00000038648 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Mink1-204ENSMUST00000102558 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Armc9-202ENSMUST00000113309 3555 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Kif18b-201ENSMUST00000021311 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Dync1i2-206ENSMUST00000112140 2573 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Pdcl-201ENSMUST00000009174 2858 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 Gm37036-201ENSMUST00000192836 2506 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Slc4a11-201ENSMUST00000099362 3196 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 C2cd5-207ENSMUST00000203673 3332 ntTSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Gm37962-201ENSMUST00000195535 2034 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Mospd1-201ENSMUST00000023836 1763 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Mospd1-202ENSMUST00000096447 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Chrm1-201ENSMUST00000035444 4159 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Gm19409-201ENSMUST00000198244 2858 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Olfr152-202ENSMUST00000105210 2084 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Mir291b-201ENSMUST00000104838 79 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Gm13611-201ENSMUST00000118269 318 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Gm17782-201ENSMUST00000174345 880 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC8□□□□□ -1.13
Hmgb3O54879 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC8□□□□□ -1.13
Hmgb3O54879 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC8□□□□□ -1.13
Hmgb3O54879 Gm19918-201ENSMUST00000194858 400 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Gm42803-201ENSMUST00000201051 451 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC8□□□□□ -1.13
Hmgb3O54879 Gm35713-201ENSMUST00000210516 199 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 AC102523.2-201ENSMUST00000227813 983 ntBASIC8□□□□□ -1.13
Hmgb3O54879 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC8□□□□□ -1.13
Hmgb3O54879 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Olfr572-201ENSMUST00000098214 957 ntAPPRIS P1 BASIC8□□□□□ -1.13
Hmgb3O54879 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Mcm5-203ENSMUST00000212426 2604 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Hmgb3O54879 Grk2-201ENSMUST00000025791 3182 ntTSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Sh3rf1-202ENSMUST00000209611 4416 ntTSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 C330007P06Rik-201ENSMUST00000047486 3467 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC8□□□□□ -1.13
Hmgb3O54879 Gm4925-202ENSMUST00000168843 1561 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms