Protein–RNA interactions for Protein: Q9Z123

Sema4f, Semaphorin-4F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4fQ9Z123 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sema4fQ9Z123 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Gm4968-201ENSMUST00000071458 858 ntBASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sema4fQ9Z123 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 AA386476-201ENSMUST00000098781 1665 ntBASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sema4fQ9Z123 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Gm7290-201ENSMUST00000104990 617 ntBASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Gm12918-201ENSMUST00000120234 636 ntBASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Gm15710-201ENSMUST00000121821 636 ntBASIC19.85■□□□□ 0.77
Sema4fQ9Z123 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Gm5075-201ENSMUST00000196916 622 ntBASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Sema4fQ9Z123 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.84■□□□□ 0.77
Sema4fQ9Z123 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sema4fQ9Z123 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Nespas-201ENSMUST00000143738 1083 ntBASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Gm6365-201ENSMUST00000054711 744 ntBASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sema4fQ9Z123 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Sema4fQ9Z123 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.83■□□□□ 0.76
Sema4fQ9Z123 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sema4fQ9Z123 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Sema4fQ9Z123 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sema4fQ9Z123 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sema4fQ9Z123 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Gm10653-202ENSMUST00000139570 835 ntBASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Gm6420-201ENSMUST00000193885 723 ntBASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sema4fQ9Z123 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sema4fQ9Z123 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sema4fQ9Z123 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sema4fQ9Z123 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sema4fQ9Z123 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.81■□□□□ 0.76
Sema4fQ9Z123 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sema4fQ9Z123 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms