Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Smarcb1Q9Z0H3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcb1Q9Z0H3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.33■□□□□ 0.84
Smarcb1Q9Z0H3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Smarcb1Q9Z0H3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcb1Q9Z0H3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcb1Q9Z0H3 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.31■□□□□ 0.84
Smarcb1Q9Z0H3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcb1Q9Z0H3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.31■□□□□ 0.84
Smarcb1Q9Z0H3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcb1Q9Z0H3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcb1Q9Z0H3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcb1Q9Z0H3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcb1Q9Z0H3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcb1Q9Z0H3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcb1Q9Z0H3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.26■□□□□ 0.83
Smarcb1Q9Z0H3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcb1Q9Z0H3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms