Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Gm26571-201ENSMUST00000181399 666 ntBASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr4Q9QUK6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr4Q9QUK6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr4Q9QUK6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr4Q9QUK6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.14■□□□□ 0.66
Tlr4Q9QUK6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr4Q9QUK6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Gm10849-201ENSMUST00000100397 618 ntBASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tlr4Q9QUK6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Gm7291-201ENSMUST00000199147 382 ntBASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr4Q9QUK6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Gm42569-201ENSMUST00000200539 472 ntBASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr4Q9QUK6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr4Q9QUK6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms