Protein–RNA interactions for Protein: Q9JKB1

Uchl3, Ubiquitin carboxyl-terminal hydrolase isozyme L3, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl3Q9JKB1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uchl3Q9JKB1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uchl3Q9JKB1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uchl3Q9JKB1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Uchl3Q9JKB1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uchl3Q9JKB1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Uchl3Q9JKB1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uchl3Q9JKB1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uchl3Q9JKB1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Uchl3Q9JKB1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Uchl3Q9JKB1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uchl3Q9JKB1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uchl3Q9JKB1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uchl3Q9JKB1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uchl3Q9JKB1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Uchl3Q9JKB1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uchl3Q9JKB1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl3Q9JKB1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl3Q9JKB1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl3Q9JKB1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.66■□□□□ 0.9
Uchl3Q9JKB1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Uchl3Q9JKB1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uchl3Q9JKB1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Uchl3Q9JKB1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Uchl3Q9JKB1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Uchl3Q9JKB1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uchl3Q9JKB1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uchl3Q9JKB1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uchl3Q9JKB1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms