Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nup50Q9JIH2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nup50Q9JIH2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup50Q9JIH2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nup50Q9JIH2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nup50Q9JIH2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup50Q9JIH2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nup50Q9JIH2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup50Q9JIH2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nup50Q9JIH2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Nup50Q9JIH2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup50Q9JIH2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Nup50Q9JIH2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.58■□□□□ 0.89
Nup50Q9JIH2 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.58■□□□□ 0.89
Nup50Q9JIH2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nup50Q9JIH2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nup50Q9JIH2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nup50Q9JIH2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nup50Q9JIH2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Nup50Q9JIH2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nup50Q9JIH2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nup50Q9JIH2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms