Protein–RNA interactions for Protein: Q9DBC3

Cmtr1, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, mousemouse

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtr1Q9DBC3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cmtr1Q9DBC3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cmtr1Q9DBC3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cmtr1Q9DBC3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cmtr1Q9DBC3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cmtr1Q9DBC3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cmtr1Q9DBC3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cmtr1Q9DBC3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cmtr1Q9DBC3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cmtr1Q9DBC3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cmtr1Q9DBC3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cmtr1Q9DBC3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cmtr1Q9DBC3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cmtr1Q9DBC3 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.1■□□□□ 0.97
Cmtr1Q9DBC3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cmtr1Q9DBC3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cmtr1Q9DBC3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cmtr1Q9DBC3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cmtr1Q9DBC3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms