Protein–RNA interactions for Protein: Q9D958

Spcs1, Signal peptidase complex subunit 1, mousemouse

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spcs1Q9D958 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Spcs1Q9D958 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.21■□□□□ 0.03
Spcs1Q9D958 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spcs1Q9D958 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Spcs1Q9D958 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.21■□□□□ 0.02
Spcs1Q9D958 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Spcs1Q9D958 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Spcs1Q9D958 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.19■□□□□ 0.02
Spcs1Q9D958 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.19■□□□□ 0.02
Spcs1Q9D958 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spcs1Q9D958 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Golph3-202ENSMUST00000226517 2359 ntBASIC15.18■□□□□ 0.02
Spcs1Q9D958 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.18■□□□□ 0.02
Spcs1Q9D958 Gm8493-201ENSMUST00000196881 489 ntBASIC15.18■□□□□ 0.02
Spcs1Q9D958 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Spcs1-204ENSMUST00000226782 949 ntBASIC15.18■□□□□ 0.02
Spcs1Q9D958 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.18■□□□□ 0.02
Spcs1Q9D958 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spcs1Q9D958 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.17■□□□□ 0.02
Spcs1Q9D958 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spcs1Q9D958 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spcs1Q9D958 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spcs1Q9D958 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spcs1Q9D958 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Spcs1Q9D958 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms