Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Vps33aQ9D2N9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps33aQ9D2N9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps33aQ9D2N9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.73■□□□□ 0.91
Vps33aQ9D2N9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps33aQ9D2N9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Vps33aQ9D2N9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps33aQ9D2N9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps33aQ9D2N9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps33aQ9D2N9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps33aQ9D2N9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps33aQ9D2N9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms