Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim42Q9D2H5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim42Q9D2H5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim42Q9D2H5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim42Q9D2H5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim42Q9D2H5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim42Q9D2H5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim42Q9D2H5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Gm12366-201ENSMUST00000121722 873 ntBASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Gm5786-201ENSMUST00000085368 882 ntBASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim42Q9D2H5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim42Q9D2H5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms