Protein–RNA interactions for Protein: Q9D236

Htra3, Serine protease HTRA3, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra3Q9D236 Gm5417-201ENSMUST00000079706 384 ntBASIC21.33■■□□□ 1.01
Htra3Q9D236 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Htra3Q9D236 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.33■■□□□ 1
Htra3Q9D236 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.33■■□□□ 1
Htra3Q9D236 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.32■■□□□ 1
Htra3Q9D236 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.32■■□□□ 1
Htra3Q9D236 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Htra3Q9D236 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 Dio3-201ENSMUST00000097228 1449 ntBASIC21.31■■□□□ 1
Htra3Q9D236 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.31■■□□□ 1
Htra3Q9D236 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.31■■□□□ 1
Htra3Q9D236 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Htra3Q9D236 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Htra3Q9D236 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Htra3Q9D236 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Htra3Q9D236 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Htra3Q9D236 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Htra3Q9D236 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Htra3Q9D236 Mir6236-201ENSMUST00000184437 123 ntBASIC21.3■■□□□ 1
Htra3Q9D236 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Htra3Q9D236 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Htra3Q9D236 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.29■■□□□ 1
Htra3Q9D236 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Htra3Q9D236 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.29■■□□□ 1
Htra3Q9D236 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.29■■□□□ 1
Htra3Q9D236 Mir5122-201ENSMUST00000175004 89 ntBASIC21.29■■□□□ 1
Htra3Q9D236 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Htra3Q9D236 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Htra3Q9D236 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.29■■□□□ 1
Htra3Q9D236 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Htra3Q9D236 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Htra3Q9D236 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Htra3Q9D236 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Htra3Q9D236 Gm6659-201ENSMUST00000174752 547 ntBASIC21.28■■□□□ 1
Htra3Q9D236 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.28■■□□□ 1
Htra3Q9D236 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Htra3Q9D236 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.28■■□□□ 1
Htra3Q9D236 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Htra3Q9D236 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.27■■□□□ 1
Htra3Q9D236 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.27■■□□□ 1
Htra3Q9D236 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Htra3Q9D236 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Htra3Q9D236 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Htra3Q9D236 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Htra3Q9D236 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Htra3Q9D236 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.27■□□□□ 0.99
Htra3Q9D236 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Htra3Q9D236 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Htra3Q9D236 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Htra3Q9D236 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Htra3Q9D236 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Htra3Q9D236 Gm15378-201ENSMUST00000121894 207 ntBASIC21.26■□□□□ 0.99
Htra3Q9D236 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Htra3Q9D236 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Htra3Q9D236 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Htra3Q9D236 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.26■□□□□ 0.99
Htra3Q9D236 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Htra3Q9D236 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Htra3Q9D236 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Htra3Q9D236 Gm18666-201ENSMUST00000190039 958 ntBASIC21.25■□□□□ 0.99
Htra3Q9D236 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Htra3Q9D236 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Htra3Q9D236 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Htra3Q9D236 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
Htra3Q9D236 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Htra3Q9D236 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Htra3Q9D236 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Htra3Q9D236 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Htra3Q9D236 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Htra3Q9D236 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Htra3Q9D236 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.23■□□□□ 0.99
Htra3Q9D236 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Htra3Q9D236 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Htra3Q9D236 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra3Q9D236 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.22■□□□□ 0.99
Htra3Q9D236 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Htra3Q9D236 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Htra3Q9D236 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Htra3Q9D236 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Htra3Q9D236 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Htra3Q9D236 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms