Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chaf1bQ9D0N7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1bQ9D0N7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chaf1bQ9D0N7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1bQ9D0N7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Chaf1bQ9D0N7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1bQ9D0N7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chaf1bQ9D0N7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chaf1bQ9D0N7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chaf1bQ9D0N7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chaf1bQ9D0N7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Gm13238-201ENSMUST00000117655 780 ntBASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chaf1bQ9D0N7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chaf1bQ9D0N7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Chaf1bQ9D0N7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Chaf1bQ9D0N7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chaf1bQ9D0N7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Chaf1bQ9D0N7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chaf1bQ9D0N7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chaf1bQ9D0N7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chaf1bQ9D0N7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms