Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Thumpd2Q9CZB3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Thumpd2Q9CZB3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Thumpd2Q9CZB3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd2Q9CZB3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd2Q9CZB3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd2Q9CZB3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd2Q9CZB3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd2Q9CZB3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd2Q9CZB3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.45■□□□□ 0.86
Thumpd2Q9CZB3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd2Q9CZB3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd2Q9CZB3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd2Q9CZB3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd2Q9CZB3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd2Q9CZB3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd2Q9CZB3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Thumpd2Q9CZB3 AA386476-201ENSMUST00000098781 1665 ntBASIC20.39■□□□□ 0.86
Thumpd2Q9CZB3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd2Q9CZB3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.38■□□□□ 0.85
Thumpd2Q9CZB3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd2Q9CZB3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd2Q9CZB3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd2Q9CZB3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.38■□□□□ 0.85
Thumpd2Q9CZB3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Thumpd2Q9CZB3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms