Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chd1lQ9CXF7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Chd1lQ9CXF7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chd1lQ9CXF7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Chd1lQ9CXF7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chd1lQ9CXF7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chd1lQ9CXF7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Chd1lQ9CXF7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Chd1lQ9CXF7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Chd1lQ9CXF7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Chd1lQ9CXF7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Chd1lQ9CXF7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Chd1lQ9CXF7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chd1lQ9CXF7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Chd1lQ9CXF7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Gm7143-201ENSMUST00000222811 859 ntBASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd1lQ9CXF7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.03■■□□□ 1.12
Chd1lQ9CXF7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd1lQ9CXF7 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.02■■□□□ 1.11
Chd1lQ9CXF7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd1lQ9CXF7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd1lQ9CXF7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd1lQ9CXF7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
Chd1lQ9CXF7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.01■■□□□ 1.11
Chd1lQ9CXF7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22■■□□□ 1.11
Chd1lQ9CXF7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd1lQ9CXF7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms