Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf135Q9CWS1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf135Q9CWS1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf135Q9CWS1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf135Q9CWS1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf135Q9CWS1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf135Q9CWS1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Rnf135Q9CWS1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf135Q9CWS1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf135Q9CWS1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf135Q9CWS1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.29■□□□□ 0.84
Rnf135Q9CWS1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf135Q9CWS1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf135Q9CWS1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf135Q9CWS1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf135Q9CWS1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf135Q9CWS1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Rnf135Q9CWS1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf135Q9CWS1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Rnf135Q9CWS1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.27■□□□□ 0.83
Rnf135Q9CWS1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf135Q9CWS1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rnf135Q9CWS1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf135Q9CWS1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf135Q9CWS1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf135Q9CWS1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf135Q9CWS1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf135Q9CWS1 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.22■□□□□ 0.83
Rnf135Q9CWS1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rnf135Q9CWS1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf135Q9CWS1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms