Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Gm4799-201ENSMUST00000095396 657 ntBASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pfdn1Q9CWM4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pfdn1Q9CWM4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pfdn1Q9CWM4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn1Q9CWM4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn1Q9CWM4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn1Q9CWM4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn1Q9CWM4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms