Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkiras2Q9CR56 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkiras2Q9CR56 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkiras2Q9CR56 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Gm7143-201ENSMUST00000222811 859 ntBASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkiras2Q9CR56 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkiras2Q9CR56 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Nkiras2Q9CR56 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nkiras2Q9CR56 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nkiras2Q9CR56 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkiras2Q9CR56 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkiras2Q9CR56 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkiras2Q9CR56 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkiras2Q9CR56 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms