Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 AA386476-201ENSMUST00000098781 1665 ntBASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Gm8493-201ENSMUST00000196881 489 ntBASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retreg3Q9CQV4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retreg3Q9CQV4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.66■□□□□ 0.74
Retreg3Q9CQV4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.65■□□□□ 0.74
Retreg3Q9CQV4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Retreg3Q9CQV4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retreg3Q9CQV4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Retreg3Q9CQV4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retreg3Q9CQV4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Smad6-203ENSMUST00000179458 273 ntBASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Gm43017-201ENSMUST00000198296 752 ntBASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retreg3Q9CQV4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Retreg3Q9CQV4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retreg3Q9CQV4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retreg3Q9CQV4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retreg3Q9CQV4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.6■□□□□ 0.73
Retreg3Q9CQV4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retreg3Q9CQV4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms