Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl54Q9CPW3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Mrpl54Q9CPW3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mrpl54Q9CPW3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mrpl54Q9CPW3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.39■□□□□ 0.37
Mrpl54Q9CPW3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl54Q9CPW3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl54Q9CPW3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl54Q9CPW3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl54Q9CPW3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mrpl54Q9CPW3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl54Q9CPW3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl54Q9CPW3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms