Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19■□□□□ 0.63
Trim16Q99PP9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Trim16Q99PP9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim16Q99PP9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim16Q99PP9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim16Q99PP9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim16Q99PP9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.95■□□□□ 0.62
Trim16Q99PP9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim16Q99PP9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim16Q99PP9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.93■□□□□ 0.62
Trim16Q99PP9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim16Q99PP9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim16Q99PP9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim16Q99PP9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim16Q99PP9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Trim16Q99PP9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim16Q99PP9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim16Q99PP9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms