Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Smad6-203ENSMUST00000179458 273 ntBASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn4rQ99PI8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.24■□□□□ 0.35
Rtn4rQ99PI8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtn4rQ99PI8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.22■□□□□ 0.35
Rtn4rQ99PI8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rQ99PI8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4rQ99PI8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4rQ99PI8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4rQ99PI8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4rQ99PI8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rQ99PI8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Gm26833-201ENSMUST00000180899 440 ntBASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms