Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Gm12821-201ENSMUST00000120022 600 ntBASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubqln4Q99NB8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Spcs1-204ENSMUST00000226782 949 ntBASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubqln4Q99NB8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubqln4Q99NB8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubqln4Q99NB8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.71■□□□□ 0.42
Ubqln4Q99NB8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubqln4Q99NB8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ubqln4Q99NB8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubqln4Q99NB8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubqln4Q99NB8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubqln4Q99NB8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.66■□□□□ 0.42
Ubqln4Q99NB8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms