Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col25a1Q99MQ5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.36■□□□□ 0.85
Col25a1Q99MQ5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.35■□□□□ 0.85
Col25a1Q99MQ5 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.35■□□□□ 0.85
Col25a1Q99MQ5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col25a1Q99MQ5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col25a1Q99MQ5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col25a1Q99MQ5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col25a1Q99MQ5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col25a1Q99MQ5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col25a1Q99MQ5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col25a1Q99MQ5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col25a1Q99MQ5 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.33■□□□□ 0.85
Col25a1Q99MQ5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col25a1Q99MQ5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.33■□□□□ 0.85
Col25a1Q99MQ5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col25a1Q99MQ5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Col25a1Q99MQ5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col25a1Q99MQ5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col25a1Q99MQ5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.33■□□□□ 0.84
Col25a1Q99MQ5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col25a1Q99MQ5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col25a1Q99MQ5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Gm37055-201ENSMUST00000191866 133 ntBASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col25a1Q99MQ5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Col25a1Q99MQ5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col25a1Q99MQ5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Col25a1Q99MQ5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.29■□□□□ 0.84
Col25a1Q99MQ5 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.29■□□□□ 0.84
Col25a1Q99MQ5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col25a1Q99MQ5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col25a1Q99MQ5 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col25a1Q99MQ5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Col25a1Q99MQ5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms