Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Mir6982-201ENSMUST00000184354 68 ntBASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx6-1Q99MA9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Gm37856-201ENSMUST00000191634 999 ntBASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx6-1Q99MA9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx6-1Q99MA9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx6-1Q99MA9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx6-1Q99MA9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx6-1Q99MA9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx6-1Q99MA9 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx6-1Q99MA9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx6-1Q99MA9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx6-1Q99MA9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx6-1Q99MA9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx6-1Q99MA9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx6-1Q99MA9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Trmt13-210ENSMUST00000198454 880 ntBASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx6-1Q99MA9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Gm7977-201ENSMUST00000193787 748 ntBASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx6-1Q99MA9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms