Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Gm10812-201ENSMUST00000099864 546 ntBASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cstf1Q99LC2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Gm6365-201ENSMUST00000054711 744 ntBASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cstf1Q99LC2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cstf1Q99LC2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Cstf1Q99LC2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cstf1Q99LC2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Gm13148-201ENSMUST00000118892 745 ntBASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cstf1Q99LC2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cstf1Q99LC2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Gm7290-201ENSMUST00000104990 617 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Gm12918-201ENSMUST00000120234 636 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Gm15710-201ENSMUST00000121821 636 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Gm5075-201ENSMUST00000196916 622 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.49■□□□□ 0.71
Cstf1Q99LC2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cstf1Q99LC2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.47■□□□□ 0.71
Cstf1Q99LC2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cstf1Q99LC2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Mir6982-201ENSMUST00000184354 68 ntBASIC19.46■□□□□ 0.71
Cstf1Q99LC2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 218.4 ms