Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rnf34Q99KR6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Rnf34Q99KR6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf34Q99KR6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf34Q99KR6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.92■□□□□ 0.94
Rnf34Q99KR6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rnf34Q99KR6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf34Q99KR6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf34Q99KR6 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.91■□□□□ 0.94
Rnf34Q99KR6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rnf34Q99KR6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rnf34Q99KR6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Rnf34Q99KR6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Rnf34Q99KR6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf34Q99KR6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rnf34Q99KR6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rnf34Q99KR6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf34Q99KR6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf34Q99KR6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.88■□□□□ 0.93
Rnf34Q99KR6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rnf34Q99KR6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf34Q99KR6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rnf34Q99KR6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf34Q99KR6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Gm9870-201ENSMUST00000063874 645 ntBASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf34Q99KR6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rnf34Q99KR6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf34Q99KR6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms