Protein–RNA interactions for Protein: Q99J87

Dhx58, Probable ATP-dependent RNA helicase DHX58, mousemouse

Predictions only

Length 678 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx58Q99J87 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Dhx58Q99J87 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Dhx58Q99J87 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dhx58Q99J87 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Dhx58Q99J87 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Dhx58Q99J87 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Dhx58Q99J87 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Dhx58Q99J87 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Dhx58Q99J87 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dhx58Q99J87 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.38■□□□□ 0.85
Dhx58Q99J87 Mir6236-201ENSMUST00000184437 123 ntBASIC20.38■□□□□ 0.85
Dhx58Q99J87 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dhx58Q99J87 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dhx58Q99J87 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Dhx58Q99J87 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Gm15820-201ENSMUST00000201566 728 ntBASIC20.36■□□□□ 0.85
Dhx58Q99J87 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.36■□□□□ 0.85
Dhx58Q99J87 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Dhx58Q99J87 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Dhx58Q99J87 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.35■□□□□ 0.85
Dhx58Q99J87 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dhx58Q99J87 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.35■□□□□ 0.85
Dhx58Q99J87 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dhx58Q99J87 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Dhx58Q99J87 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dhx58Q99J87 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Dhx58Q99J87 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.33■□□□□ 0.85
Dhx58Q99J87 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Dhx58Q99J87 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Dhx58Q99J87 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Dhx58Q99J87 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Dhx58Q99J87 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.33■□□□□ 0.85
Dhx58Q99J87 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Dhx58Q99J87 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Dhx58Q99J87 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.32■□□□□ 0.84
Dhx58Q99J87 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.32■□□□□ 0.84
Dhx58Q99J87 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Dhx58Q99J87 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.32■□□□□ 0.84
Dhx58Q99J87 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Dhx58Q99J87 Gm43530-201ENSMUST00000195920 274 ntBASIC20.32■□□□□ 0.84
Dhx58Q99J87 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Dhx58Q99J87 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Dhx58Q99J87 Gm9870-201ENSMUST00000063874 645 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms