Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb6Q91XZ4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb6Q91XZ4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb6Q91XZ4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb6Q91XZ4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb6Q91XZ4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb6Q91XZ4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdhb6Q91XZ4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb6Q91XZ4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb6Q91XZ4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Mir7075-201ENSMUST00000184187 82 ntBASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb6Q91XZ4 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb6Q91XZ4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhb6Q91XZ4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms