Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb2Q91XX7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhgb2Q91XX7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb2Q91XX7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb2Q91XX7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 Gm9870-201ENSMUST00000063874 645 ntBASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb2Q91XX7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb2Q91XX7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdhgb2Q91XX7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhgb2Q91XX7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhgb2Q91XX7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb2Q91XX7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb2Q91XX7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms