Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.87■□□□□ 0.93
TraipQ8VIG6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TraipQ8VIG6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
TraipQ8VIG6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TraipQ8VIG6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.85■□□□□ 0.93
TraipQ8VIG6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TraipQ8VIG6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TraipQ8VIG6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.84■□□□□ 0.93
TraipQ8VIG6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.84■□□□□ 0.93
TraipQ8VIG6 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.84■□□□□ 0.93
TraipQ8VIG6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TraipQ8VIG6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TraipQ8VIG6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TraipQ8VIG6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.83■□□□□ 0.93
TraipQ8VIG6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TraipQ8VIG6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TraipQ8VIG6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TraipQ8VIG6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Gm29257-201ENSMUST00000186115 639 ntBASIC20.81■□□□□ 0.92
TraipQ8VIG6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Gm7514-201ENSMUST00000209475 934 ntBASIC20.81■□□□□ 0.92
TraipQ8VIG6 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.81■□□□□ 0.92
TraipQ8VIG6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TraipQ8VIG6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.81■□□□□ 0.92
TraipQ8VIG6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TraipQ8VIG6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.8■□□□□ 0.92
TraipQ8VIG6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TraipQ8VIG6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TraipQ8VIG6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TraipQ8VIG6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.79■□□□□ 0.92
TraipQ8VIG6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.79■□□□□ 0.92
TraipQ8VIG6 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.79■□□□□ 0.92
TraipQ8VIG6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TraipQ8VIG6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TraipQ8VIG6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TraipQ8VIG6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TraipQ8VIG6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TraipQ8VIG6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TraipQ8VIG6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.78■□□□□ 0.92
TraipQ8VIG6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms