Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Mir6236-201ENSMUST00000184437 123 ntBASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cspg4Q8VHY0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cspg4Q8VHY0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 Gm18101-201ENSMUST00000215769 548 ntBASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cspg4Q8VHY0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cspg4Q8VHY0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cspg4Q8VHY0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Gm9987-201ENSMUST00000069768 567 ntBASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cspg4Q8VHY0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Gm26524-201ENSMUST00000192339 390 ntBASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cspg4Q8VHY0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cspg4Q8VHY0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Gm13534-201ENSMUST00000121169 513 ntBASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cspg4Q8VHY0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Gm6420-201ENSMUST00000193885 723 ntBASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms