Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Gm7143-201ENSMUST00000222811 859 ntBASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40cQ8VHQ4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Mir6236-201ENSMUST00000184437 123 ntBASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Gm10399-202ENSMUST00000202768 748 ntBASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40cQ8VHQ4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rab40cQ8VHQ4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rab40cQ8VHQ4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rab40cQ8VHQ4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rab40cQ8VHQ4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms