Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Gm6420-201ENSMUST00000193885 723 ntBASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc71Q8VEG0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc71Q8VEG0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Gm13534-201ENSMUST00000121169 513 ntBASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Gm6365-201ENSMUST00000054711 744 ntBASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc71Q8VEG0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc71Q8VEG0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.37■□□□□ 0.85
Ccdc71Q8VEG0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc71Q8VEG0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc71Q8VEG0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc71Q8VEG0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc71Q8VEG0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ccdc71Q8VEG0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc71Q8VEG0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc71Q8VEG0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc71Q8VEG0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc71Q8VEG0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc71Q8VEG0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms