Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Gm5643-201ENSMUST00000117081 966 ntBASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lmcd1Q8VEE1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Gm11643-201ENSMUST00000119578 864 ntBASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lmcd1Q8VEE1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lmcd1Q8VEE1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Gm715-201ENSMUST00000117865 831 ntBASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lmcd1Q8VEE1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lmcd1Q8VEE1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lmcd1Q8VEE1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Lmcd1Q8VEE1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.91■□□□□ 0.94
Lmcd1Q8VEE1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lmcd1Q8VEE1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Lmcd1Q8VEE1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lmcd1Q8VEE1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lmcd1Q8VEE1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lmcd1Q8VEE1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lmcd1Q8VEE1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms