Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx39aQ8VDW0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.76■■□□□ 1.07
Ddx39aQ8VDW0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Gm13234-201ENSMUST00000120010 747 ntBASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx39aQ8VDW0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Ddx39aQ8VDW0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx39aQ8VDW0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx39aQ8VDW0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx39aQ8VDW0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx39aQ8VDW0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx39aQ8VDW0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ddx39aQ8VDW0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ddx39aQ8VDW0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx39aQ8VDW0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ddx39aQ8VDW0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx39aQ8VDW0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx39aQ8VDW0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx39aQ8VDW0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx39aQ8VDW0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 AA386476-201ENSMUST00000098781 1665 ntBASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx39aQ8VDW0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ddx39aQ8VDW0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms