Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndfip1Q8R0W6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndfip1Q8R0W6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndfip1Q8R0W6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndfip1Q8R0W6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ndfip1Q8R0W6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.27■□□□□ 0.03
Ndfip1Q8R0W6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndfip1Q8R0W6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Mir6236-201ENSMUST00000184437 123 ntBASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ndfip1Q8R0W6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndfip1Q8R0W6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndfip1Q8R0W6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndfip1Q8R0W6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndfip1Q8R0W6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndfip1Q8R0W6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ndfip1Q8R0W6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndfip1Q8R0W6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndfip1Q8R0W6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndfip1Q8R0W6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndfip1Q8R0W6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms