Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Gm15820-201ENSMUST00000201566 728 ntBASIC12.22□□□□□ -0.45
Cystm1Q8K353 Gm10232-201ENSMUST00000089221 720 ntBASIC12.22□□□□□ -0.45
Cystm1Q8K353 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Gm45102-201ENSMUST00000207427 857 ntBASIC12.21□□□□□ -0.45
Cystm1Q8K353 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.21□□□□□ -0.45
Cystm1Q8K353 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cystm1Q8K353 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cystm1Q8K353 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cystm1Q8K353 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cystm1Q8K353 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.19□□□□□ -0.46
Cystm1Q8K353 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.19□□□□□ -0.46
Cystm1Q8K353 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cystm1Q8K353 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC12.18□□□□□ -0.46
Cystm1Q8K353 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.18□□□□□ -0.46
Cystm1Q8K353 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.18□□□□□ -0.46
Cystm1Q8K353 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cystm1Q8K353 AC117245.4-201ENSMUST00000217388 1646 ntBASIC12.18□□□□□ -0.46
Cystm1Q8K353 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cystm1Q8K353 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cystm1Q8K353 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms